PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G18690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 265aa MW: 29256.1 Da PI: 7.0659 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 100 | 144 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+++++++ +qlG+g+W+ I++ + + Rt+ q+ s+ qky OGLUM10G18690.1 100 PWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKY 144 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MEQHEEAAER KPSPPVIFRL FGVEVRGGGG GVDEEEYEEE EVEGGLFIKK SSSMPNLTSI 60 DPLPVPADGG KRRASDDSEL ASGQQKRRRR KVLERKKGVP WTEEEHKKFL EGLRQLGKGD 120 WRGISKNFVT SRTATQVASH AQKYFLRQTN PGKKKRRASL FDVVAECSDD QLPSPQSVGT 180 KPPTQDIIHT DRGDVPILSY PVARGFRGDS VQVDELTEYV KRLKAAEDMS LSMISGLEMA 240 SSSISSLELS IAPPHCAIEA AIKVL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 71 | 91 | KRRASDDSELASGQQKRRRRK |
2 | 86 | 91 | KRRRRK |
3 | 86 | 97 | KRRRRKVLERKK |
4 | 87 | 97 | RRRRKVLERKK |
5 | 153 | 157 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 3e-31 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G18690.1 |