PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM10G09100.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bHLH

Protein Properties

Length: 88aa MW: 9920.3 Da PI: 9.3331

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM10G09100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.1	4.8e-06	13	55	14	54
HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54 d+iN+ +++L++llP++s ++ + L++ + YIksL OGLUM10G09100.1 13 DEINELISKLQSLLPESSrrRGATSRSPATKLLKEMCSYIKSL 55 68**************887844444555566799999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence
MSGRRASGRI TDDEINELIS KLQSLLPESS RRRGATSRSP ATKLLKEMCS YIKSLHREVD 60 DLSERLSELM ATMDSNSPQA DIIRSLLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26945.1	3e-27	bHLH family protein

Link Out ? help Back to Top
Ensembl	OGLUM10G09100.1