PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM10G08400.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 318aa    MW: 33678.7 Da    PI: 4.8806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM10G08400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19114164256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      +++GVr ++ +g+W+AeIrdp+    r  r++lg+f tae Aa+a++aa+++l+g+
  OGLUM10G08400.1 114 RFRGVRKRP-WGKWAAEIRDPV----RgVRVWLGTFPTAESAARAYDAAARRLRGA 164
                      69*******.**********63....56**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MSQTQSNSNQ THLPTPNPSS ARAMCGGAIL ADLIPSPPSG GHTNKNKRWR ISDDEDFEAA  60
FEEFDAGDDD SDSESEEVDE YDVVVDDDDS EDGVVVLPPP PPPVIPHERH GARRFRGVRK  120
RPWGKWAAEI RDPVRGVRVW LGTFPTAESA ARAYDAAARR LRGAKAKPNF PSAPPPSAAA  180
HRRKKRRAHA ATRSPSSPPA TSEVTAASAS ASSDVPAPAF ASFVGEPGHG GAKSMPTTSH  240
TSQPAPPATV ASENVDDPEV FDPYDVHGGL ASYFAGGAYE SLESLFAHGG DSAAVDQAAS  300
DHWPAALWSF ADDGSFCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.14e-15ERF family protein