PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM10G05830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | WRKY | ||||||||
Protein Properties | Length: 248aa MW: 27632.9 Da PI: 7.29 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 25 | 3.8e-08 | 53 | 96 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 r YYrC+++ +C+++k v++++ dp + +tY H+++ OGLUM10G05830.1 53 IYRLYYRCSYRddrNCMATKVVQQENdADPPLYRVTYIHPHTCN 96 5699******99999*******9865269************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MASRHQLQTM QFTDPASRSP RPGGGVHGQP QPTPMSSPFS SRKPRRWCKT VAIYRLYYRC 60 SYRDDRNCMA TKVVQQENDA DPPLYRVTYI HPHTCNPSPP APTPAHVFTE PPPAKAEEHH 120 AVLFRFSSTA GGHTPNNAVH RQQWQPAAAT MAAGAQAQLS MTMSDDEREQ PPAAIRSAPP 180 ARRLSMFRAV VDGLRQMRSS APPTPSSSMV VDDGWDTFSS FDLDTCEFSV DDELLCGDHM 240 YFPDSMQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66600.1 | 4e-11 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM10G05830.1 |