PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM09G17730.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | DBB | ||||||||
Protein Properties | Length: 244aa MW: 26888.1 Da PI: 6.2728 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.8 | 9.1e-08 | 3 | 30 | 4 | 31 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedCll 31 ++C+ +e+ ++ lfC ++ lC++C + OGLUM09G17730.1 3 TICDVCESAPAVLFCVADEAALCRSCDE 30 68************************87 PP | |||||||
2 | zf-B_box | 27.5 | 6.3e-09 | 85 | 124 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++Ce +++ lC +C ++ H g H OGLUM09G17730.1 85 KVQRCDICENAPAFFYCEIDGTSLCLSCDMTVHVGgkrtH 124 6799*****************************6655556 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MRTICDVCES APAVLFCVAD EAALCRSCDE KVPPLSNPAF VLCSTTRTRR SPLAESNGSA 60 EEHDVHMCNK LARRHVRVGL ADPNKVQRCD ICENAPAFFY CEIDGTSLCL SCDMTVHVGG 120 KRTHGRYLLL RQRVEFPGDK PGHMDDVAMQ QKDPENRTDQ KKAPHSVTKE QMANHHNVSD 180 DPASDGNCDD QGNIDSKMID LNMRPVRTHG QGSNSQTQGV DVSVNNHDSP GVVPTCNFER 240 EANK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.3 | 4e-70 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM09G17730.1 |