PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G06630.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 359aa    MW: 37572.8 Da    PI: 6.5628
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G06630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.35.7e-27125185158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +dDg++WrKYGqKe+ g+++pr+YYrCt++   gC+++k+v+r++ed +v++++Y+geH++
  OGLUM09G06630.1 125 VDDGHSWRKYGQKEILGAKHPRGYYRCTHRnsqGCMATKQVQRTDEDATVFDVIYHGEHTC 185
                      59***************************98889*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MESMEGNGGG RLVVTELSHI KELVRQLEGH LGGSGSPDLC KHLASQIFSV TERSIGMIRS  60
GHFDGHRKRS AAAVAAGDLD SATPSPLSDV SDLPFKATKK RKTSTEKKRH QIRVSSTGGV  120
ENPPVDDGHS WRKYGQKEIL GAKHPRGYYR CTHRNSQGCM ATKQVQRTDE DATVFDVIYH  180
GEHTCVHKAV AAGAGKPETD ANAAAESRLH DLSSGLTVKI EGLTAPPQQQ QGGGGWNAMP  240
PFCLSSPVSG LAPPDQHNPF SAPSTPENRL AAAASSAASP ATSDSMAAAP FHQAAAGGGD  300
AAWRDAELQE VVSALVAATT TTATAQPAPA AAMVDADLSA LDAFEFDPGF TIDITSFFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-32WRKY family protein