PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G05680.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 318aa    MW: 35759.3 Da    PI: 5.3247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G05680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.7e-1671120154
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                      s+y+GVr++  +g+W+AeIrd +     r  r ++g+f ++eeAa+a+ a  ++++
  OGLUM09G05680.1  71 SKYRGVRRRA-WGKWAAEIRDpV-----RkSRKWIGTFNSEEEAAAAYLAQSNQFH 120
                      89*****777.**********44.....55******************88766665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MMVPSSRKVR VFCSDPDATD SSDEDDQNKK ERRFTREILI PMENSKTSKP VKTLVQCGTK  60
TVKDSEKEPT SKYRGVRRRA WGKWAAEIRD PVRKSRKWIG TFNSEEEAAA AYLAQSNQFH  120
EELMALKIQS SVSEREDLSS SVTISCVSSS QSCDQKIQAR PQEHKRVSVV INHETVEQKF  180
KAQPQAQKIK AQPEVQKRVS VKISHETEDE HLLNLPSTPK GKEISMGAVL GRIDEIPVSN  240
CVGHIDEFPP DDFTRLADAF PVSDFIGMAD VPLGDDYIGL ADISHLPLPI TDPKFDLDAE  300
LNWDGFNFAS LEQELNCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-17ERF family protein