PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM09G04670.5
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 167aa    MW: 17763.7 Da    PI: 7.4067
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM09G04670.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.61.2e-28105157254
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg 54 
                      d g++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+ +d+++v++tY g
  OGLUM09G04670.5 105 DAGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERALHDTRAVITTYAG 157
                      569************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MPLRAGSRPV LRNTPSGCAA AAACADQYSA ATPDNSSVTF GDDEADNESH SSEGYEPEAK  60
CWKEDADNEG SSGGMGGGAG GKPVRKPRLV VHTLSDIDIN IDILDAGFRW RKYGQKVVKG  120
NPNPRSYYKC TTVGCPVRKH VERALHDTRA VITTYAGAVV QRDPAVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.13e-36WRKY family protein