PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G25360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15940.3 Da PI: 9.4312 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.1e-20 | 20 | 72 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr+++ +g+++AeIrd ++ r++lg+f+taeeAa+a+++a+ +++g+ OGLUM08G25360.1 20 TKYRGVRRRP-SGKFAAEIRDS---SrQSVRVWLGTFDTAEEAARAYDRAAYAMRGH 72 69********.7*********3...2236**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MDGGGGGGWD DQGNGGGETT KYRGVRRRPS GKFAAEIRDS SRQSVRVWLG TFDTAEEAAR 60 AYDRAAYAMR GHLAVLNFPA EARNYVRGSG SSSSSRQQQQ QQQHQHQQRQ VIVLECLDDQ 120 VLQEMLKGGD DQYRSAAGSK RNNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G04370.1 | 2e-21 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G25360.1 |