PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G23090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 24512 Da PI: 10.2589 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.6 | 7.8e-30 | 19 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk.atgkdkev 92 lppGfrFhPtdeelvv+yL++k+ g +l++ vi+++ +++k++Pwd+p + +++ + yfF+ r ++ +g+r++ +++ g Wk a g+dk+v OGLUM08G23090.1 19 LPPGFRFHPTDEELVVQYLRRKAFGLPLPA-AVIPDLhNLFKLDPWDIPGA--SSDGDKYFFAVRPPAA-RGRRQQVTASGGCWKpAGGRDKPV 108 79****************************.8899998***********43..456789*****99875.68899999999****66678***9 PP NAM 93 lsk...kgelvglkktLvfy........kgrapkgektdWvmheyrl 128 +++ +++lvg+kk +vf + a + W+mhey+l OGLUM08G23090.1 109 VVArcgGSHLVGVKKGMVFVprqgrkapAAAAAAAGGGCWIMHEYSL 155 9988988999**********8854433222333333667******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MERAAAAAPV VVRHGGVVLP PGFRFHPTDE ELVVQYLRRK AFGLPLPAAV IPDLHNLFKL 60 DPWDIPGASS DGDKYFFAVR PPAARGRRQQ VTASGGCWKP AGGRDKPVVV ARCGGSHLVG 120 VKKGMVFVPR QGRKAPAAAA AAAGGGCWIM HEYSLALPMH KKGCLAEAEE WVVCRIFQRS 180 SSGSRSPRRP DNDVRRTMPA VAELGRSPSS SSSQSSCVTS SSDQEEVSSG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 5e-31 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G23090.1 |