PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM08G19840.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 276aa MW: 28784.8 Da PI: 7.7658

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM08G19840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.5	1.3e-37	59	117	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + +cprC+s++tkfCyynny++sqPr+fCk CrryWtkGG+lrnvPvGgg+rk+ +ss OGLUM08G19840.1 59 EGDPCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKKSSSS 117 5678**************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MQEQQPETGR RPAQQFATVD LRRPKGYAAA PATPQPGSAA TAAAAAGPAA TAAAAAAGEG 60 DPCPRCESRD TKFCYYNNYN TSQPRHFCKC CRRYWTKGGT LRNVPVGGGT RKKSSSSSSS 120 SSSSSAAAAA PAAKRQKTSK KRRVTTPGPL AATTPVLTEA AADSAAKTTT EATSEKKTTT 180 STTTTTPPAP DTTSEITTEL VVPAVEEDSF TDLLQPDSAA VTLGLDFSDY PSITKSLADP 240 DLHFEWPPPA FDMASYWPAG AGFADPDPTA VFLNLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-28	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM08G19840.1