PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM08G03510.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 806aa MW: 87836.1 Da PI: 6.6921 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.8 | 6.6e-15 | 81 | 125 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+ E+ ++++a k++G W +I +++g ++t+ q++s+ qk+ OGLUM08G03510.2 81 RERWTEAEHNRFLEALKLYGRA-WQRIEEHVG-TKTAVQIRSHAQKF 125 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 806 aa Download sequence |
MQLLSRRRRG RRSEAASLVG IALLALEGDG AVGHSFGGGG ARIKEVFGLR RLTAIGSIQI 60 NSSGEEAVVK VRKPYTITKQ RERWTEAEHN RFLEALKLYG RAWQRIEEHV GTKTAVQIRS 120 HAQKFFTKLE KEAINNGTSP GQAHDIDIPP PRPKRKPNSP YPRKSCLSSE TSTREVQNDK 180 ATISNMTNNS TAQMAGDAAL EKLQRKEISE KGSCSEVLNL FREVPSASFS SVNKSSSNHG 240 ASRGLEPTKT EVKDVVILER DSISNGAGKD AKDINDQEME RLNGIHISSK PDHSHENCLD 300 TSSQQFKPKS NSVETTYVDW SAAKASHYQM DRNGVTGFQA TGTEGSHPDQ TSDQMGGASG 360 TMNQCIHPTL PVDPKFDGNA AAQPFPHNYA AFAPMMQCHC NQDAYRSFAN MSSTFSSMLV 420 STLLSNPAIH AAARLAASYW PTVDGNTPDP NQENLSESAQ GSHAGSPPNM ASIVAATVAA 480 ASAWWATQGL LPLFPPPIAF PFVPAPSAPF STADVQRAQE KDIDCPMDNA QKELQETRKQ 540 DNSEAMKVIV SSETDESGKG EVSLHTELKI SPADKADTKP AAGAETSDVF GNKKKQDRSS 600 CGSNTPSSSD IEADNAPENQ EKANDKAKQA SCSNSSAGDN NHRRFRSSAS TSDSWKEVSE 660 EVVVYQHSAY SHLSYSLNIH HCFSNSHFCC QGRLAFDALF SRERLPQSFS PPQVEGSKEI 720 SKEEEDEVTT VTVDLNKNAA IIDQELDTAD EPRASFPNEL SNLKLKSRRT GFKPYKRCSV 780 EAKENRVPAS DEVGTKRIRL ESEAST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46830.1 | 3e-40 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM08G03510.2 |