PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G26470.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 334aa MW: 34971.7 Da PI: 6.6682

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G26470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	73.6	2.5e-23	123	184	2	59
--SS-EEEEEEE--TT-S.S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgse.fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg +WrKYGqK++++s+ +prsYYrCt++ gC+++k+v++s+++ + ++i Y geH+++ OGLUM07G26470.1 123 EDGRQWRKYGQKHIQDSPnNPRSYYRCTHRpdqGCMATKHVQTSESNSSEFVISYYGEHTCR 184 89************9736*****9999************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MASPDGGVGD GGAEPHEVMD DLLEMREQAA MLHSMLHGTS PSSCAAAAST RQLNQLIDGV 60 MSRLQSSSLS VMSPGGGGGG RRGSGGRKKK GATAVAGPHR RSSSGRRRSK SPFVRMVTTK 120 ELEDGRQWRK YGQKHIQDSP NNPRSYYRCT HRPDQGCMAT KHVQTSESNS SEFVISYYGE 180 HTCRDPSTIP FVVEAEAPAA DYANLISFGS SGGASTSRVD PLRQSRHRLM AEAVDPTPSC 240 SFANCHSPVL SPECASEAAA LSSSLPLSAV VGSAVTTPST SIVGSAPSDY DWPSGLAGGD 300 MAGSFPSSPS SLGFMTGSFG NLPGDDDDMF GFDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	8e-19	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G26470.1