PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G23550.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

GeBP

Protein Properties

Length: 328aa MW: 35673.4 Da PI: 9.6959

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G23550.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	107.8	8e-34	31	130	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+ OGLUM07G23550.1 31 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEI 124 79**********************99877778***********************************8889************* PP DUF573 92 skkiWg 97 ++ iW+ OGLUM07G23550.1 125 ARNIWR 130 ***8 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MATPAAAGGG GGSGSAGGVG SSSGGGERRP LFQRLWTEED EIVILRGFAE FTAARGTAFA 60 SHQYDTDPFY EDMRGRLQLG FSKSQLVEKL RRLKRKYRNC VSRLRGSGSA FSFRSPHEQA 120 IFEIARNIWR PTNKHGRDGD SDDEDATQVT PAPVPVNTSP NGEVKSPTSG RQRRRRRGGD 180 FAATAPAAAP ATTNMVQPIQ PVQVPVSVPV KMDDTLPALS QTTMPITVTM EGSEPLRLPV 240 MPPQPAVLDA DKSCLTPLFK EMVRAVINIG SNPFGAQLSE PPHGLPMEGE KWRKQRILEL 300 EVYLKRIELL QDQVKATLEE LKSSAPGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	6e-35	GeBP family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G23550.1