PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G23080.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 265aa MW: 29661.2 Da PI: 7.3047 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.8 | 2.5e-05 | 36 | 76 | 1 | 45 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLe 45 +r ++erE+ Rd+ N+ f+eL ll ++ + + Ka +L OGLUM07G23080.2 36 KRIHKSEREKLKRDKQNDLFNELGNLLEPD----RQNNGKACVLG 76 68899**********************996....34455555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MVPRDRVNAA AAGGGGDGRL VQSGIVNKKC DKKAPKRIHK SEREKLKRDK QNDLFNELGN 60 LLEPDRQNNG KACVLGETTR ILKDLLSQVE SLRKENSSLK NESHYVALER NELHDDNSML 120 RTEILELQNE LRTRMEGNPV WSHVNTRPAL RVPYPTTGVF PVQHLPHLPV TTTAAFPQQQ 180 PVIIEQHYAA TPRELQLFPE SATSEDSEPS QEHGISDHVT RPQARYPTPT ATLPVNLFPV 240 FPGRQDQQCS SGTSGTNEED RIGRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 2e-35 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G23080.2 |