PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G21630.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NF-YA
Protein Properties Length: 277aa    MW: 30199.2 Da    PI: 8.998
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G21630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.41e-32123179158
        CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      +ep++VNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRh+hA++R+RgsgGrF
  OGLUM07G21630.1 123 EEPIFVNAKQYHAILRRRQIRAKLEAQNKL-VKGRKPYLHESRHRHAMKRARGSGGRF 179
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MKQLGHKMYD QDSPSSDSGQ SHQEESAMND SSPNERHTST QSDNDDGHQM PDQDKTKSVS  60
SLGNPGALPP KLDYSQSFAC IPYTADAYYG GVLTGYSSHA IVHPQQNGTA NSRVPLPVEP  120
AAEEPIFVNA KQYHAILRRR QIRAKLEAQN KLVKGRKPYL HESRHRHAMK RARGSGGRFL  180
NTKQLEEQKQ QQEEEAASGG ASSGNRTCLQ NGTGSAPSAS SPSEIASVST SREFLGNHEQ  240
SHFPSAGFLP TMSFRAQNGG DGKLVANAIH QRVSMMR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164173RHRHAMKRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.19e-34NF-YA family protein