PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G12390.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 271aa    MW: 28399.9 Da    PI: 7.6811
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G12390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.83.3e-26130187258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                      dD y WrKYGqK++ g++f+rsYYrC++  gC+++k+v++s++dp+ +eitY g H++
  OGLUM07G12390.1 130 DDSYPWRKYGQKDILGARFARSYYRCAQMlGCTARKQVQQSDDDPSQLEITYIGLHTC 187
                      8**************************999**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MASGAGGGTA ATERLIRSAQ KSTNQLKALL AGGGGGGGRS SGAVEVILAD ISDSLSQALA  60
SLMLRAACDD QSLPAAAPPP PPPEASLLPS YGQCVVANSG GRSVSKRKAQ RRSRADGSSR  120
RIILELGDRD DSYPWRKYGQ KDILGARFAR SYYRCAQMLG CTARKQVQQS DDDPSQLEIT  180
YIGLHTCGGD RPSSPAPTNP ADGPRCDAAT SSHRLLPSAL QQKLEEHVPA ASDDMMMACT  240
PSWLFIPSPA CSQSELLSEG ESIGILLSLN T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.19e-22WRKY family protein