PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM07G10870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 22718.1 Da PI: 8.9855 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 73 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 g+ GVr ++ +gr++AeIrd + ng r++lg+f++ae Aa a+++a+++ +g OGLUM07G10870.1 73 GFIGVRKRP-WGRFAAEIRDSTRNG--VRVWLGTFDSAEAAAMAYDQAALSARG 123 789******.**********44465..***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MEQHSHCWYY GGGMAVTAAA GAGAASSTSS ESQPSGYDYE TAGSAEVSAP GGGAGRERAA 60 RKEEGGAGAA AAGFIGVRKR PWGRFAAEIR DSTRNGVRVW LGTFDSAEAA AMAYDQAALS 120 ARGAAAALNF PVERVRESLR ALALGAAGGS PVLALKGRHS KRKRRKRSEL AGATATANKT 180 TTTTSATTGG EHKQIVLELE DLGADYLEEL LWMSEQTSH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 166 | KRKRRK |
2 | 161 | 167 | KRKRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 1e-19 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM07G10870.1 |