PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM07G10380.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 316aa    MW: 33127.8 Da    PI: 6.6611
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM07G10380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.23e-27130190259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      dDg++WrKYGqK++ g+++pr+YYrCt++   gC+++k+v+r+++d ++++++Y+geH+++
  OGLUM07G10380.1 130 DDGHSWRKYGQKDILGAKHPRGYYRCTHRntqGCTATKQVQRTDDDASLFDVVYHGEHTCR 190
                      8***************************98889**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MEGVVDGSGA QLVVAELVRV QGLLRQLEAH LSAPCSVELC RGLAAQIVAL TDRSIGIATR  60
SFSSASGGGA HFADTAPPMP ALTSCTPSPL SDGSDHQPFR TTNAKKRKTT ARWTSQVRVS  120
AAGGAEGPAD DGHSWRKYGQ KDILGAKHPR GYYRCTHRNT QGCTATKQVQ RTDDDASLFD  180
VVYHGEHTCR PGGASAAAAK RPHAQTLLQS LSASLTVNTD TNTPLTPENR ATAPPLQQQQ  240
SVSASPVASD SYGLGGAGYG DWRCCDGDLQ EVVSALATVT SAPDHAAMDA ADFMSYCFDF  300
DPAVYGGIVG TPSFFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-26WRKY family protein