PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM07G00780.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 297aa MW: 30912.5 Da PI: 7.0534

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM07G00780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.6	1.2e-33	126	183	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+ OGLUM07G00780.1 126 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHSHH 183 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MAGAGDWPFA ADEAYADSSA IFAELGWANG LAVVDAVGEL LPPLDPPGEL ATPPPPPLDL 60 PETPAGSSAD GAASSCSTDD ADGGKPAAAS TEAASKSLTS GKKGGKKRAR QPRFAFMTKS 120 EIDHLEDGYR WRKYGQKAVK NSPFPRSYYR CTNSKCTVKK RVERSSDDPS VVITTYEGQH 180 SHHTVTFPRA AAAAAGFSHI HAMAALAAAA APFSPHQQLY SNQLQPPATM PLAATTPAAS 240 SSSSLLQLPL HCNHELQVVA SCGGGYPSSS SSSSPASTVP VDRGLLDDMV PRAMRHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	8e-50	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM07G00780.1