PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G24950.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 278aa MW: 30003.5 Da PI: 6.5348

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G24950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	56.1	8.2e-18	134	186	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 e kr rr+ +NRe+ArrsR+RK+a++ eLe v++L++eN++L k+l e +++ OGLUM06G24950.1 134 ETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQ 186 68******************************************888777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MMKKCPSELQ LEAFIREEAG AGDRKPGVLS PGDGARKSGV FSPGDGEMSV LDQSTLDGSG 60 GGHQLWWPES VRTPPRAAAA FSATADERTP ASISDDPKPT TSANHAPESD SDSDCDSLLE 120 AERSPRLRGT KSTETKRIRR MVSNRESARR SRRRKQAQLS ELESQVEQLK GENSSLFKQL 180 TESSQQFNTA VKMAEDMVAR AAMSCGLGQL GLAPLLSSRK MCQALDMLSL PRNDACGFKG 240 LNLSRQVQNS PVQSAASLES LDNRISSEVT SCSADVWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	156	RRSRRRKQ
2	151	156	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-17	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G24950.1