PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM06G04560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 19663.1 Da PI: 11.1922 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.8 | 4.9e-17 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+WvAeIr+p +kr r++lg++ ta Aa+a++ a +l+g OGLUM06G04560.1 44 QYRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAAARAYDTAVFYLRG 93 69*****99.**********9...336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MDRREATVFL PPPPPPLTQP QPPQQPAAAV RAPVGGRGGG GGRQYRGVRM RKWGKWVAEI 60 REPNKRSRIW LGSYSTAVAA ARAYDTAVFY LRGRSARLNF PDQLDGAGGG GGSGGGAEDH 120 RELTAAAIRK KAAEVGARVD AQHSVVGAAA PVPLQPPQPP PPQRRRTKNP DLNREPTPDT 180 SDDE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 42 | GGRGGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36900.1 | 2e-26 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM06G04560.1 |