PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM06G00470.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 515aa MW: 56329.1 Da PI: 7.4639

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM06G00470.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.6	1e-08	303	340	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++ LA+++gL+ +qV++WF N R + OGLUM06G00470.2 303 FEHflHPYPNDVDKHILARQTGLSRSQVSNWFINARVR 340 554459******************************88 PP
2	BELL	60.7	3.4e-20	179	227	24	72
BELL 24 kqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ve++++v sFeavag g+a++Yt+lA++a+SrhFrcL+da+++q+ OGLUM06G00470.2 179 LSMVEEMRAVEVSFEAVAGGGAAQVYTKLAMRAMSRHFRCLRDALVGQV 227 55789*****************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MMAAHHHHHE HHHLLDMSSP PNASGAIISS FDHAAGLLSL HDVAAAADHH HHHLRGGGGG 60 LQLPSPWSQQ QVSLSLYNNA AGAAGSPPSS LVAHQQLAAA QPLMFQLRGS KYLGPVKALL 120 AEFCSLDVEA MDGAKQQRAP NPNPKIGKWD DVEGSGSWGN LSLSSMDLLD LERRKARILS 180 MVEEMRAVEV SFEAVAGGGA AQVYTKLAMR AMSRHFRCLR DALVGQVRAL RNAMGESQRD 240 AAGGVAAAAP GATKGDTPRL RVLDQCLRQQ RAFQQSGAVD SFPWRPQRGL PERAVAVLRA 300 WLFEHFLHPY PNDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMIEDMY KEETKPESSD 360 GNNKLNPSAA GNKQQHRDDP KKNYTATTAE ASLVQQSSYH LHLRSRGNPN SSSLMIPAAA 420 STSIDHHHDS SHQLLGGHSY SSAAGLHHGH GGAVSLTLGL QQQQQPFAAS MMHQHQQQQQ 480 QQQQSFMVEA AEEEEDDVLP YRNLMESQLL HDFAG

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MMAAHHHHHE HHHLLDMSSP PNASGAIISS FDHAAGLLSL HDVAAAADHH HHHLRGGGGG  60
LQLPSPWSQQ QVSLSLYNNA AGAAGSPPSS LVAHQQLAAA QPLMFQLRGS KYLGPVKALL  120
AEFCSLDVEA MDGAKQQRAP NPNPKIGKWD DVEGSGSWGN LSLSSMDLLD LERRKARILS  180
MVEEMRAVEV SFEAVAGGGA AQVYTKLAMR AMSRHFRCLR DALVGQVRAL RNAMGESQRD  240
AAGGVAAAAP GATKGDTPRL RVLDQCLRQQ RAFQQSGAVD SFPWRPQRGL PERAVAVLRA  300
WLFEHFLHPY PNDVDKHILA RQTGLSRSQV SNWFINARVR LWKPMIEDMY KEETKPESSD  360
GNNKLNPSAA GNKQQHRDDP KKNYTATTAE ASLVQQSSYH LHLRSRGNPN SSSLMIPAAA  420
STSIDHHHDS SHQLLGGHSY SSAAGLHHGH GGAVSLTLGL QQQQQPFAAS MMHQHQQQQQ  480
QQQQSFMVEA AEEEEDDVLP YRNLMESQLL HDFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	4e-84	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM06G00470.2