PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G28850.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 328aa    MW: 35634 Da    PI: 6.1783
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G28850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.71.8e-26174232259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YY+C+s   C+++k vers e p v++itY  eH h 
  OGLUM05G28850.1 174 TDLWAWRKYGQKPIKGSPYPRGYYKCSSLkACMARKMVERSPEKPGVLVITYIAEHCHA 232
                      699************************9989*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MTITHASSLS RFHPLLKKLI MEYSNDWDLQ ALVRSCGTAV ADSEPEPPAA PSTTRRAEAE  60
TVVVGRAGGV PEFVGQPVRS AAASFYDLEY LDLYHELPRA PFLVTAPSTS RERGEGGEHE  120
VLISFPAIAS TSGQGRKQPG RKPGVRTARP KRSKKSQLKK VVCEVPVADG GVSTDLWAWR  180
KYGQKPIKGS PYPRGYYKCS SLKACMARKM VERSPEKPGV LVITYIAEHC HAVPTQLNSL  240
AGTTRNNKPA SPDQQQQQPS PGGASTDEAA AAAAKTEDSA DTTCSMADDE NDLWAPVEMD  300
MDDFFGPFDD DLDHFLDDDA VLGRRLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.14e-36WRKY family protein