PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G28080.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 278aa    MW: 29728.2 Da    PI: 4.7877
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G28080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY825.9e-26101161158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      ldDg +WrKYGqK++ g+++pr+Y+rCt++   gC+++k+v+r++ dp +++++Y g+H++
  OGLUM05G28080.1 101 LDDGLSWRKYGQKDILGAKYPRAYFRCTHRhtqGCNATKQVQRADGDPLLFDVVYLGDHTC 161
                      58***************************98999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MVELCGGEGE GQIMLATELA QLRAMARELE AKMDPDRVAA RELCRALASS VDRSIRLAAS  60
CFPPPEHPPP AAGNAGRDAA KGMAKVRRQV RVTSVQDTAS LDDGLSWRKY GQKDILGAKY  120
PRAYFRCTHR HTQGCNATKQ VQRADGDPLL FDVVYLGDHT CGQAAVAAVA QSAPPEHAGQ  180
EQQRQSSLLA AGTEGIHQQV VAEPMEAAAA AAPFLFTSTA AGGVDDGYFS FISPANSDCQ  240
FSSDFSAGSV GVDMDHEACF EDLFSNTLEF FQSEIQNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-29WRKY family protein