PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G21430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 285aa    MW: 31641.9 Da    PI: 7.5398
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G21430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.56.5e-19141202259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59 
                      +Dg++WrKYG K++ +sefpr YYrC ++   +C++kk v++++ + p  + +t + eH+++
  OGLUM05G21430.1 141 NDGFHWRKYGEKKILNSEFPRLYYRCGYSderKCQAKKYVQQENnKHPPEFRVTLTKEHTCN 202
                      7**************************998899*******987615788999*******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MARRLPKSER SPSPPPPPPG DQRDAAIQEL SKGSELATQL MAQLELIPER ELNGRRDDAL  60
ANVRSLSMSL SSSLYALRSE RREHYYCGSS SSGGAGPAAV TSVSGGGRGG GSGARNKTKR  120
RRGKHGEELT ETVFVTTTPE NDGFHWRKYG EKKILNSEFP RLYYRCGYSD ERKCQAKKYV  180
QQENNKHPPE FRVTLTKEHT CNTLFQDQPS SSSTNSQVLD FTKASISSPL MDSHVGAPTL  240
KEEEEEEVPS IDESSRIMST IMRNYGAYGD YDESSPQPWN GAGWQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-14WRKY family protein