PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G21420.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 322aa    MW: 34414.6 Da    PI: 4.428
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G21420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY841.4e-26119179259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dg+ WrKYGqKe+k+s++pr YYrC+++   gC+++k+v++s+edp++ +itY g+H+++
  OGLUM05G21420.1 119 EDGFLWRKYGQKEIKNSKHPRLYYRCSYKddhGCTATKQVQQSEEDPSIYVITYFGDHTCS 179
                      7***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MALIATGATA SPASSMASEL MAQGRESAAV LEALLHGASL PPAHGGAHAL AAEILRCCDR  60
ALAALRAGGD AESSSPGTKR SKPATAQPAT RRRRRATASG GGAAAAAETA RVDRARTSED  120
GFLWRKYGQK EIKNSKHPRL YYRCSYKDDH GCTATKQVQQ SEEDPSIYVI TYFGDHTCSC  180
QTAAAMDDDD DDDENSQHFV IHFGSATASR NGSPPLLYDD DDDGDVWRET AATPPSSRQS  240
RSSPEVDGEE SGVKMSKEEP VDSCPAPSAV SSPADVVSCS SPAMEPDLLR CLNWDDDFGD  300
SSFVDADEFM NFDEIDLFQI YS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-21WRKY family protein