PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G21120.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 575aa MW: 59751.3 Da PI: 5.5018

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G21120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.7e-32	219	276	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK++kgse+prsYY+Ct++gCp+kkkve+s d++v+ei+Y+g H h+k OGLUM05G21120.1 219 DDGYNWRKYGQKQMKGSENPRSYYKCTFPGCPTKKKVEQSP-DGQVTEIVYKGAHSHPK 276 8**************************************.*************85 PP
2	WRKY	106.5	1.4e-33	394	452	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver+++d ++v++tYeg+Hnh+ OGLUM05G21120.1 394 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTAGCPVRKHVERASNDLRAVITTYEGKHNHD 452 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MTAAPGSLPL VNSRPVALSL AASRSSFSSL LSGGAGSSLN LMTPPSSLPP SSPSSYFGGV 60 SSSGFLDSPI LLTPSLFPSP TTTGALFSWM TTATATAATA PESQVQGGVK DEQQQYSDFT 120 FLPTASTAPA TTMAGATATT SNSFMQDSVL MAPLGGDPYN GEQQQPWSYQ EPTMDADTRP 180 AEFTSSAAAG DVAGNGGYSQ VAAPAAAGGF RQQSRRSSDD GYNWRKYGQK QMKGSENPRS 240 YYKCTFPGCP TKKKVEQSPD GQVTEIVYKG AHSHPKPPQN GRGRGGSGYA LHGGAASDAY 300 SSADALSGTP VATPENSSAS FGDDEAVNGV SSSLRVASSV GGGGGGEDLD DDEPDSKRWR 360 RDGGDGEGVS LVAGNRTVRE PRVVVQTMSD IDILDDGYRW RKYGQKVVKG NPNPRSYYKC 420 TTAGCPVRKH VERASNDLRA VITTYEGKHN HDVPAARGSA AAALYRATPP PQASNAGMMP 480 TTAQPSSYLQ GGGGVLPAGG YGASYGGAPT TTQPANGGGF AALSGRFDDD ATGASYSYTS 540 QQQQQPNDAV YYASRAKDEP RDDGIMSFFE QPLLF

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MTAAPGSLPL VNSRPVALSL AASRSSFSSL LSGGAGSSLN LMTPPSSLPP SSPSSYFGGV  60
SSSGFLDSPI LLTPSLFPSP TTTGALFSWM TTATATAATA PESQVQGGVK DEQQQYSDFT  120
FLPTASTAPA TTMAGATATT SNSFMQDSVL MAPLGGDPYN GEQQQPWSYQ EPTMDADTRP  180
AEFTSSAAAG DVAGNGGYSQ VAAPAAAGGF RQQSRRSSDD GYNWRKYGQK QMKGSENPRS  240
YYKCTFPGCP TKKKVEQSPD GQVTEIVYKG AHSHPKPPQN GRGRGGSGYA LHGGAASDAY  300
SSADALSGTP VATPENSSAS FGDDEAVNGV SSSLRVASSV GGGGGGEDLD DDEPDSKRWR  360
RDGGDGEGVS LVAGNRTVRE PRVVVQTMSD IDILDDGYRW RKYGQKVVKG NPNPRSYYKC  420
TTAGCPVRKH VERASNDLRA VITTYEGKHN HDVPAARGSA AAALYRATPP PQASNAGMMP  480
TTAQPSSYLQ GGGGVLPAGG YGASYGGAPT TTQPANGGGF AALSGRFDDD ATGASYSYTS  540
QQQQQPNDAV YYASRAKDEP RDDGIMSFFE QPLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	7e-86	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G21120.1