PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM05G19250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 260aa MW: 28905.7 Da PI: 6.2938 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.6 | 4.2e-35 | 4 | 126 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppG+rF Pt+eelv++yL++k++g + ++e+vi+ +d ++ +++ + w++F++r++++a+g r++r+t sgyWka g+ v OGLUM05G19250.1 4 LPPGYRFYPTEEELVCFYLRHKLDGGRrvPDIERVIPVADAHQ---GA----WTGDGEPWFYFCPRQEREARGGRPSRTTPSGYWKAAGTPGWV 90 79***********************995444444455544443...33....3457789*********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s++g+ +g+kkt+vfy+grap g kt+W m+eyr+ OGLUM05G19250.1 91 YSSDGRPIGTKKTMVFYRGRAPAGAKTKWKMNEYRA 126 **********************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MGELPPGYRF YPTEEELVCF YLRHKLDGGR RVPDIERVIP VADAHQGAWT GDGEPWFYFC 60 PRQEREARGG RPSRTTPSGY WKAAGTPGWV YSSDGRPIGT KKTMVFYRGR APAGAKTKWK 120 MNEYRAFEED DDNAAAAAPA QNHYLQTRSD FSLCRLYTRS GCPRQFDRRP PSSSVASGGG 180 ENRAAPSSTA AAFANEDAAE SSGKSQKRKR SAPDDRLDST SSSDDNGGCD GSMLQQRQRG 240 TDEELVECSM TDWADLLDWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-59 | NAC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM05G19250.1 |