PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G17320.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 646aa MW: 68793 Da PI: 7.7391

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G17320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.7	1.1e-12	170	231	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ + +L ++++ e a+l+++ OGLUM05G17320.1 170 EEDKRRAARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVVAENATLRQQ 231 5677899*******************************9999*999888888888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 646 aa Download sequence
MAEPALLDPT AAFDLRLYPA HLFDHELPLA GGGGGDDDDD LPLDGLEFDL PGDFSVEDFL 60 LRSPERDDSG EGSAAGSGPT ASPSSSPTTS ASNSAVANGS GGEVKHEESD EGRSGGGDPK 120 WSLKRKQASP GPSSDAAKCR RSGDGDVSPS ASASRTAVDS DEGGTVCEEE EDKRRAARLM 180 RNRESAQLSR QRKKRYVEEL EEKVKSMHSV INDLNSRISF VVAENATLRQ QLSGGSVNCP 240 PPGVYPPAPI PGMHFPWMPG YAMRPPGSHV PLVPIPRLKP QQPVPSSKVV KKPESKKTVE 300 NKSKSKTKTK KVASVSLLGL LLIMLVFGAF IPGFNHNFGM GGQSDNAMFR NFGQSHARVL 360 SVSSQDKSSL NNSDMISVDV GKMTGNTDGP GKKHQPAHNS SEILPALLYV PRNGKHVKIN 420 GNLIIHSVLA SEKAVAHKAS KDDSDQSARD HKETSVAIAR YLSLPGKDVN RQETSSADGP 480 LPQWFREGME GPILNSGMCS EVFQFDISTA SSNPGGIIPA SPVVNSSSVN ATEKIPAHSA 540 AYHGKLKNRR VMYNEAIPLT GKTANNTEPF NRTSESSSKL PDSKPASSVV VSVLADPREA 600 GNGDGDPRVS PKPLSKIFVV VLVDGVRYVT YSCTLPFKSS SPHLVN

Sequence ? help Back to Top

Protein Sequence Length: 646 aa Download sequence

MAEPALLDPT AAFDLRLYPA HLFDHELPLA GGGGGDDDDD LPLDGLEFDL PGDFSVEDFL  60
LRSPERDDSG EGSAAGSGPT ASPSSSPTTS ASNSAVANGS GGEVKHEESD EGRSGGGDPK  120
WSLKRKQASP GPSSDAAKCR RSGDGDVSPS ASASRTAVDS DEGGTVCEEE EDKRRAARLM  180
RNRESAQLSR QRKKRYVEEL EEKVKSMHSV INDLNSRISF VVAENATLRQ QLSGGSVNCP  240
PPGVYPPAPI PGMHFPWMPG YAMRPPGSHV PLVPIPRLKP QQPVPSSKVV KKPESKKTVE  300
NKSKSKTKTK KVASVSLLGL LLIMLVFGAF IPGFNHNFGM GGQSDNAMFR NFGQSHARVL  360
SVSSQDKSSL NNSDMISVDV GKMTGNTDGP GKKHQPAHNS SEILPALLYV PRNGKHVKIN  420
GNLIIHSVLA SEKAVAHKAS KDDSDQSARD HKETSVAIAR YLSLPGKDVN RQETSSADGP  480
LPQWFREGME GPILNSGMCS EVFQFDISTA SSNPGGIIPA SPVVNSSSVN ATEKIPAHSA  540
AYHGKLKNRR VMYNEAIPLT GKTANNTEPF NRTSESSSKL PDSKPASSVV VSVLADPREA  600
GNGDGDPRVS PKPLSKIFVV VLVDGVRYVT YSCTLPFKSS SPHLVN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	195	KRRAARLMRNRESAQLSRQRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-81	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G17320.1