PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G12420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | WRKY | ||||||||
Protein Properties | Length: 215aa MW: 22619 Da PI: 5.8995 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 85.5 | 4.7e-27 | 15 | 74 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++ gs++prsYYrCt++ gC++kkkv+r ++dp + e+tY g+H++ OGLUM05G12420.1 15 DDGYTWRKYGQKDILGSRYPRSYYRCTHKnyyGCEAKKKVQRLDDDPFTYEVTYCGNHTC 74 8***************************99999*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVAAQWTGNT EQPPDDGYTW RKYGQKDILG SRYPRSYYRC THKNYYGCEA KKKVQRLDDD 60 PFTYEVTYCG NHTCLTSTTP LLTLPAAAAT SVTNSPTAAA VLGQDLVMAP AADQQPPQHQ 120 QAQPPLSTSI HLGIGWPMTP ASLAGAVGEG STSTTATAPQ VTTMGATAAG GGGAAARDAD 180 HYPVADLADV MFNSGGSGSS SIMDGIFSSH DRRDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 9e-37 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G12420.1 |