PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G12060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 23819.4 Da PI: 5.7264 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.7 | 4e-10 | 51 | 85 | 18 | 55 |
AP2 18 eIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 eIrdp + kr +lg+f+taeeAa+ ++ a+++++g OGLUM05G12060.1 51 EIRDP-----SlqKRLWLGTFDTAEEAAAVYDDAALRIKG 85 79999.....445************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MSPADSLAAG RSRRVGASMP RPKRVRVYFV DADATDTDSS GDERSRPRVR EIRDPSLQKR 60 LWLGTFDTAE EAAAVYDDAA LRIKGSHAVT NFPSDSDTPS AKAKQMKLHP RRHTTPDKTT 120 PSSSTAAAAK ASVPDPKPAP PEEDRANDSS FNPFASPTSV LRYAAADEVT APSFEHLLVE 180 LGDLSAPPPS TKAAEFDWLP WWEGEDFVTA GLTASNAVSV K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03800.1 | 1e-07 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G12060.1 |