PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G04450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | LBD | ||||||||
Protein Properties | Length: 214aa MW: 22097.2 Da PI: 8.8075 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129 | 2.1e-40 | 31 | 130 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +CaaCk+lrr+Ca++C+++pyf +p+kfa vhk+FGasnv+k+l +++e++r da++slvyeA+ r+rdPvyG++g il+lqqq++ l+ael OGLUM05G04450.1 31 PCAACKLLRRRCAQECPFSPYFSPLEPHKFASVHKVFGASNVSKMLLEVHESQRGDAANSLVYEANLRLRDPVYGCMGAILTLQQQVQALEAEL 124 7********************************************************************************************* PP DUF260 95 allkee 100 a++++ OGLUM05G04450.1 125 AAVRAD 130 *99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MMARRSCSMP AAGAGPGSAA AAAAAVNTIT PCAACKLLRR RCAQECPFSP YFSPLEPHKF 60 ASVHKVFGAS NVSKMLLEVH ESQRGDAANS LVYEANLRLR DPVYGCMGAI LTLQQQVQAL 120 EAELAAVRAD IARHKYRLPS AAAVLPSSHA SHLLAAAAAA RQLPVAGTMG VVTTATLPAS 180 ASSSSTTAVY AAAAAASSST DYSSITNENV PYFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30340.1 | 7e-58 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G04450.1 |