PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM05G00230.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 339aa MW: 36875 Da PI: 6.502 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.5 | 5.7e-09 | 190 | 237 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + + Y++sLq OGLUM05G00230.4 190 SHSLAERVRREKISERMKMLQSLVPGC----DKVTGKALMLDEIISYVQSLQ 237 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MESLCGQLEH EHEQQLHQSS SSSLLPYCFL SAPEPLPVPG FPAGCSNLEE KAAAAMAAYE 60 YESSSCSSLD PTSMPMVYSP IVLQPQECPL SFVFDNAAAA AGDNKWVPGI QGSCPCSLGS 120 TQDMDASWGK SRKHKRSNVG LKGLEEKKAR RVVLHQHDDD VKKKAKEAAG GEPPAGYIHV 180 RARRGQATDS HSLAERVRRE KISERMKMLQ SLVPGCDKVT GKALMLDEII SYVQSLQNQV 240 EFLSMKLASL SPLMYEFGPG IDMHPDVLRQ LAKMPHEMVQ CMGQMGSTGI SLQGLGGGPT 300 GFAQDGSSHM NMVVMQVGEQ GQQQGSLHQV EMSNHCFFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 166 | RKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-48 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM05G00230.4 |