PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM04G24370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 212aa MW: 21545 Da PI: 6.9612 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 46.5 | 1.4e-14 | 65 | 98 | 35 | 68 |
TCP 35 LqdeLGfdkdsktieWLlqqakpaikeltgtsss 68 L++eLG++++++t++WLlqqa+pai +tgt+ s OGLUM04G24370.1 65 LTRELGHKSNGETVQWLLQQAEPAIVTATGTGVS 98 8******************************433 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 212 aa Download sequence |
MWGPPEDASA RREGEDPLSA AADIGGGGGG GGEEDAGARA EVELEQGPAH QGGRPGTTNP 60 DAGVLTRELG HKSNGETVQW LLQQAEPAIV TATGTGVSVD IPRALPPFPK LRPLQVAPPP 120 PPHVGCRRRA ARRVRGVRRC HIGFVTMFAG HAAAAMPGLE LGLSQDGHIG VLSARSLSQF 180 YHQVGGADAA DQLPHPAASS PTPSAAAGGR GG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G58100.1 | 9e-13 | TCP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM04G24370.1 |