PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G24300.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 308aa    MW: 32166.6 Da    PI: 10.5914
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G24300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.12.8e-31222279359
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp ++++tYegeH+h+
  OGLUM04G24300.1 222 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPAMLVVTYEGEHRHT 279
                      9************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MAVDLMGCYA PRRADDQLAI QEAATAGLRS LEMLVSSLSS SSQAAGAHKA SPQQQPFGEI  60
ADQAVSKFRK VISILDRTGH ARFRRGPVES SAPAAPVAAA PPPPPPPAPV AAALAPTSSQ  120
PQTLTLDFTK PNLTMSAATS VTSTSFFSSV TAGEGSVSKG RSLLSSGKPP LSGHKRKPCA  180
GGHSEATANG GRCHCSKRRK NRVKRTIRVP AISSKIADIP PDEYSWRKYG QKPIKGSPYP  240
RGYYKCSTVR GCPARKHVER ATDDPAMLVV TYEGEHRHTP GPLPAPPAAA AVAAIPVSVA  300
VSTGNGHV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-78WRKY family protein