PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G14540.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 439aa    MW: 48069.5 Da    PI: 4.6326
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G14540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3359.94.9e-110443382300
                      XXXXXXXXXXXXXXXXXXXXXX..XXXXX...........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa..........tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                      +lkkrmwkdqmll++l++r+ ++ + + +           +++++++ ++ ++rrk+m raQDg+L++Mlk+me+cna+GfvYgi++e+g pv+
  OGLUM04G14540.1  44 DLKKRMWKDQMLLMKLEGRSGHEGALAAQGhrvvrgeeaaAEEEEEEPPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVS 137
                      8******************99977655555678877777677777889********************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
             EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                      g+sdsLr+WWk++v+fdr gp+a+s +       +++s   +++ s  h l ++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG e+
  OGLUM04G14540.1 138 GSSDSLRGWWKDDVAFDRVGPTALSGR------GGRGSPA-AAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLPPPWWPTGGEA 224
                      **************************9......3444444.56999************************************************ PP

                      HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXX CS
             EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqsp 272
                      wwg +g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp++++ir+l++qsk+lq+kmsa++ +++++v+ qee++ ++   +         
  OGLUM04G14540.1 225 WWGLQGeAQASQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQIRKLVWQSKRLQHKMSARDADTWSRVITQEEALSRHALRS-------LH 311
                      ****************************************************************************977543333.......22 PP

                      XXXXXXXXXXXXXXXXXXX.XXXXXXXX CS
             EIN3 273 kvtlsceqkedvegkkeskikhvqavkt 300
                       + l+++++e +eg   ++ +h+ ++k+
  OGLUM04G14540.1 312 ITPLDDDDDEPNEGPTPRE-SHADKRKR 338
                      2333333333333333222.44444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MDDKGKAKAA DAAAATEAAP EQEEKEEEFL SDSESGCESI EIADLKKRMW KDQMLLMKLE  60
GRSGHEGALA AQGHRVVRGE EAAAEEEEEE PPEARYRRKA MLRAQDGVLR HMLKMMEACN  120
ARGFVYGIVD ESGVPVSGSS DSLRGWWKDD VAFDRVGPTA LSGRGGRGSP AAAAASFLHG  180
LLDIQDSTLG SLLSALIQHC EPPQRSFPLD RGLPPPWWPT GGEAWWGLQG EAQASQGPPP  240
YRKPHDLKKA WKISLLSAVI KHLSPRFDQI RKLVWQSKRL QHKMSARDAD TWSRVITQEE  300
ALSRHALRSL HITPLDDDDD EPNEGPTPRE SHADKRKREV GGGEEMQLSL PVDIDVVPEA  360
DRSSIDELMK LYYSCLQGTD TDGSGEQGKD GAGGDGSVAP ETVHVDDADM LEGLLGVAQV  420
VDMSDFPDSP IWHWGSSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.18e-87EIL family protein