PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM04G03150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TCP | ||||||||
Protein Properties | Length: 183aa MW: 18788 Da PI: 6.9728 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 107.2 | 2.6e-33 | 51 | 130 | 3 | 78 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaess 78 k ++s++h+kv gR+RRvR++a +aar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt+ +++++ +ss OGLUM04G03150.1 51 RKSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAEPSIIAATGTGVTPEEAPpaavAIGSS 130 577899*********************************************************66666333222211222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MASSSDLILY NLVPAQPLNP SAIPNPNPDL SIAAAEPPSS DGATPRRVRP RKSPSSSDRH 60 SKVAGRGRRV RIPAMVAARV FQLTRELGHR TDGETIEWLL RQAEPSIIAA TGTGVTPEEA 120 PPAAVAIGSS SVAAAAAAAG HGGAFVHVPY YTALLMQPPN ADEPPMASAA SASGTTAADE 180 NNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 46 | 52 | RRVRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 8e-28 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM04G03150.1 |