PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G38110.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 283aa MW: 30609.7 Da PI: 5.995

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G38110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.3	4.4e-10	154	180	1	27
XXXXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkae 27 e+elkrerrkq+NRe+ArrsR+RK+++ OGLUM03G38110.1 154 ERELKRERRKQSNRESARRSRLRKQER 180 89***********************97 PP
2	bZIP_1	28.1	4.3e-09	200	237	26	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +e+eeL +kv L+a N++L+ el++lkk ++ +++e+ OGLUM03G38110.1 200 QECEELSQKVTDLTAVNSTLRTELDKLKKDCEDMEAEN 237 89********************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MQAYYAAAAA AAAAGGHPYA WPPPQSVPPM AGCAVPSAAA EGKSKRKTSG GPSGEDSSGS 60 GDGGSEDSSE RRDDADEKGL SPAKWRKLGH PDIEGETSQA AAMSEQNPVK AAPNLNIGMD 120 IWSNSTMVAM PSGQVEVNAG THLRRDKALS QMDERELKRE RRKQSNRESA RRSRLRKQER 180 PTSFCHPPNY PVTFYGLTNQ ECEELSQKVT DLTAVNSTLR TELDKLKKDC EDMEAENSQL 240 MDEMVQSEGS SVIATLSIKI DTSKDRHGSS SQLNKHTNDD SKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	177	RRSRLRK
2	171	178	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.2	1e-26	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G38110.1