PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G37150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 294aa MW: 31263.2 Da PI: 5.8095 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26 | 1.7e-08 | 144 | 188 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ K + a++L + +Y+k L OGLUM03G37150.1 144 HSIAERLRRERIAERMRALQELVPNT-----NKTDRAAMLDEILDYVKFL 188 99***********************7.....5***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence |
MAGQQPQQQG PPEDDFFDQF FSLTSSFPGA APGGRAAGDQ PFSLALSLDA AAAAEASGSG 60 KRLGVGDDAE GGGSKADRET VQLTGLFPPV FGGGGVQPPN LRPTPPTQVF HPQQSKQGGA 120 AVGPQPPAPR PKVRARRGQA TDPHSIAERL RRERIAERMR ALQELVPNTN KTDRAAMLDE 180 ILDYVKFLRL QVKVLSMSRL GGAGAVAQLV ADIPLSVKGE ASDSGGNQQI WEKWSTDGTE 240 RQVAKLMEED IGAAMQFLQS KALCMMPISL AMAIYDTQQT QDGQPVKHEP NTPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 154 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 5e-54 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G37150.1 |