PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G34520.4
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 186aa    MW: 19578.2 Da    PI: 8.3464
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G34520.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.91.8e-1722602159
                     -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                     p sYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
  OGLUM03G34520.4 22 PTSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 60
                     88**********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MSTTTTSIAG HLRAITAMVG PPTSYYRCTN SKCTVKKRVE RSSDDPSVVI TTYEGQHCHH  60
TASFQRGVGG AAVAAHIHGA AAVALAEQMS AFVSPPPQPH MLYGLPRLHP PSSSETAVSC  120
SMPTTTSLQE LNNGEGLQRP GYNNSPQAAV TIAQRPPSPS VPPAVSFDKG LLDDIVPPGI  180
TKTFFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-22WRKY family protein