PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G34520.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 220aa    MW: 23795.9 Da    PI: 9.8788
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G34520.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1054e-333693259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                     +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
  OGLUM03G34520.1 36 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPSVVITTYEGQHCHH 93
                     8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTRPAAAATA TAKKGQKRAR QPRFAFMTKS EIDHLEDGYR WRKYGQKAVK NSPFPRSYYR  60
CTNSKCTVKK RVERSSDDPS VVITTYEGQH CHHTASFQRG VGGAAVAAHI HGAAAVALAE  120
QMSAFVSPPP QPHMLYGLPR LHPPSSSETA VSCSMPTTTS LQELNNGEGL QRPGYNNSPQ  180
AAVTIAQRPP SPSVPPAVSF DKGLLDDIVP PGTYLPTLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-49WRKY family protein