PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G31690.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

GeBP

Protein Properties

Length: 375aa MW: 40054.9 Da PI: 7.0732

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G31690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	87.1	2.3e-27	87	181	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 +fqr+wse+De+ +LqGl+ + +g d++ fy+ +++s+ + +++sql+eK+rrLK+Kf+++++++++g +p+ ++hd+++++l++++ OGLUM03G31690.1 87 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPSPYTRSQLSEKLRRLKNKFRGMSARVARGLDPARLAPHDRDVLHLCSRL 179 79*****************.556878888************************************************************* PP DUF573 96 Wg 97 W+ OGLUM03G31690.1 180 WD 181 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MASDQTLPVP VSVELPPAAP NPPDPTAPLL PHADDPSAPP AAAAAARKLP VKRRSPPPRP 60 SSPSSSDPAS SDPAAKQQPQ QPPPPFKFQR IWSESDELRF LQGLLGCGAQ GLVFPRDLNV 120 FYDRFSESMP SPYTRSQLSE KLRRLKNKFR GMSARVARGL DPARLAPHDR DVLHLCSRLW 180 DPANATTSPF AAAGDASSGN KRRRAAPRAG PLMPPDPSGD SNSHDYNGGI SAGTPGAFGD 240 GHGGEEMMYL EQESGHFGYH GDVAIAADGS LDGIVKVQPE TLPALPSIGD IAVHSENGNG 300 KAVVPRSNEH HMANAVLDIF EECLREVKAN GITYGANVNG GSELARRWRA QRIDELDVLS 360 RRLRLLVEDA AAAGR

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MASDQTLPVP VSVELPPAAP NPPDPTAPLL PHADDPSAPP AAAAAARKLP VKRRSPPPRP  60
SSPSSSDPAS SDPAAKQQPQ QPPPPFKFQR IWSESDELRF LQGLLGCGAQ GLVFPRDLNV  120
FYDRFSESMP SPYTRSQLSE KLRRLKNKFR GMSARVARGL DPARLAPHDR DVLHLCSRLW  180
DPANATTSPF AAAGDASSGN KRRRAAPRAG PLMPPDPSGD SNSHDYNGGI SAGTPGAFGD  240
GHGGEEMMYL EQESGHFGYH GDVAIAADGS LDGIVKVQPE TLPALPSIGD IAVHSENGNG  300
KAVVPRSNEH HMANAVLDIF EECLREVKAN GITYGANVNG GSELARRWRA QRIDELDVLS  360
RRLRLLVEDA AAAGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	1e-09	GeBP family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G31690.1