PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM03G21930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 317aa MW: 34778.8 Da PI: 9.621 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.5 | 2e-32 | 163 | 219 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rakle+++k k+rkpylheSRh+hA++R+RgsgGrF OGLUM03G21930.1 163 EEPIFVNAKQYNAILRRRQTRAKLEAQNKA-VKGRKPYLHESRHRHAMKRARGSGGRF 219 69****************************.**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 317 aa Download sequence |
MIMLLQEMEN HPVQCMAKTN YDFLARNNYP MKQLVQRNSD GDSSPTKSGQ SHQEASAVSD 60 SSLNGQHTSP QSVFVPSDIN NNDSCGERDH GTKSVLSLGN TEAAFPPSKF DYNQPFACVS 120 YPYGTDPYYG GVLTGYTSHA FVHPQITGAA NSRMPLPVDP SVEEPIFVNA KQYNAILRRR 180 QTRAKLEAQN KAVKGRKPYL HESRHRHAMK RARGSGGRFL TKKELLEQQQ QQQQQKPPPA 240 SAQSPTGRAR TSGGAVVLGK NLCPENSTSC SPSTPTGSEI SSISFGGGML AHQEHISFAS 300 ADRHPTMNQN HRVPVMR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 204 | 213 | RHRHAMKRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G14020.1 | 8e-37 | NF-YA family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM03G21930.1 |