PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G19400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GeBP | ||||||||
Protein Properties | Length: 178aa MW: 19238.2 Da PI: 6.7999 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 87.9 | 1.2e-27 | 82 | 154 | 2 | 71 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71 lfqrlw+eeDeiv+L+++ +f+a++g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ OGLUM03G19400.1 82 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVDR 154 79*************************9977778***********************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MLPTVVDDPS AAAAAAVGAA ASSSFPDADV YGNGDSDDID FPSDPNHATT QAFSSATAAA 60 AAAGPGGGGG AGSGSGGERR PLFQRLWTEE DEIVILRAFA EFTAQRGTAF ASHQYDTDPF 120 YEDMRRRLQL DFSKSQLVEK LRRLKRKYRN CVDRLRATGH LGRWDGDRRW RRLLGVTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 4e-25 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G19400.1 |