PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G15660.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 200aa    MW: 22720.4 Da    PI: 8.4681
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G15660.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY64.51.7e-202384259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa.edpkvveitYegeHnhe 59
                     +Dg++WrKYG K++++ +fpr YYrCt++   +Cp++k++++++ +dp +  +tY +eH+++
  OGLUM03G15660.2 23 NDGHQWRKYGEKKINNCNFPRYYYRCTYKdnmNCPATKQIQQKDySDPPLYSVTYYNEHTCN 84
                     8***************************99999*******976538**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MFLKKTCRKE KRMRKVDTFA PHNDGHQWRK YGEKKINNCN FPRYYYRCTY KDNMNCPATK  60
QIQQKDYSDP PLYSVTYYNE HTCNSAFLPL SPSEFQLQTA SGKAVSICFE SSGAQEPMTN  120
ASSPSSSAAR RSTPSENKNQ PLPRHSEAYS WGVGVVEQKP SCTELQSCST ECQDAFSAGT  180
IPEETVDAGR FGSIRFFHFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-19WRKY family protein