PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G13980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 32079.8 Da PI: 5.3248 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.3e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ + +G+g+W++++++ g ++R++k+c++r+ +yl OGLUM03G13980.1 14 KGPWTAEEDAKLLAYTSTHGTGNWTSVPQRAGrLKRCGKSCRLRYTNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5.3e-17 | 70 | 111 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eE+el+v ++++lG++ W++Ia+ ++ gRt++++k++w++ OGLUM03G13980.1 70 NFTQEEEELIVTLHAMLGSR-WSLIANQLP-GRTDNDVKNYWNT 111 89******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MGRPPCCDKA NVKKGPWTAE EDAKLLAYTS THGTGNWTSV PQRAGRLKRC GKSCRLRYTN 60 YLRPNLKHEN FTQEEEELIV TLHAMLGSRW SLIANQLPGR TDNDVKNYWN TKLSKKLRQR 120 GIDPITHRPI ADLMQSIGTL AIRPPPAAGA APPPCLPVFH DAPYFAALQQ QQVVTHVDAD 180 APASPDSQHL QLNWSDFLAD DAAGHGADAP APQAALGQYQ EGSAPAATAV VGGGRAFGDV 240 DGASAGVGDG TDDGAGAASA FIDAILDCDK EMGVDQLIAE MLADPAYYGG GGGSFSSELG 300 WGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56110.1 | 2e-64 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G13980.1 |