PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G09050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 139aa MW: 16126.6 Da PI: 4.9805 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.2 | 2.7e-22 | 42 | 136 | 2 | 89 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + GfrF Pt+e l+++yL++k++g + ++e vi+ +diy+++P +L + + +e + w++F++r++++ +g r++ +t sgyWka g+ OGLUM03G09050.1 42 ALGFRFYPTEEKLICFYLRNKLDGLRDDIECVIPIFDIYSIDPLQLSEihhemlgSSGEEGEPWFYFCPRQEREVRGGRPSWTTPSGYWKAVGT 135 67************************999888**************85456655433336669****************************997 PP NAM 89 d 89 OGLUM03G09050.1 136 P 136 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MAKRKEWLTT TRLTMHMVVQ QDWIEVCPMD ELGPAMLGLR LALGFRFYPT EEKLICFYLR 60 NKLDGLRDDI ECVIPIFDIY SIDPLQLSEI HHEMLGSSGE EGEPWFYFCP RQEREVRGGR 120 PSWTTPSGYW KAVGTPGVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-33 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G09050.1 |