PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G06890.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TCP | ||||||||
Protein Properties | Length: 74aa MW: 7916.98 Da PI: 8.103 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 34.8 | 5.7e-11 | 34 | 74 | 5 | 45 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkds 45 k ++++ h+kv+ + R+R+ + a +F+L +eLG+++d+ OGLUM03G06890.1 34 KPPSKDCHSKVDTLGCRIRMHIIYTAHIFQLNRELGHKSDG 74 8899***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence |
MTKVHGDGGG GAALDKQLVP DASNDNGTAF AICKPPSKDC HSKVDTLGCR IRMHIIYTAH 60 IFQLNRELGH KSDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 7e-17 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G06890.1 |