PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM03G06050.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 35396.8 Da PI: 8.5918 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 5.9e-19 | 115 | 165 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GVr+++ +gr++AeIrdp++ +r++lg++g+aeeAa a+++ +++++g OGLUM03G06050.2 115 SKYRGVRRRP-SGRFAAEIRDPKK---GRRVWLGTYGSAEEAAMAYDREARRIRG 165 89********.7*********954...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MGDVSPGERR ARRAMCGGAI LADFTPARVP RRLTAAELLP VTPTPPAAER RTTRKRKSDV 60 DFEAEFELFE DDDDDDEFEL SDDGDEISSD VSSSSRPRRR VAAAAAGRRK ASKKSKYRGV 120 RRRPSGRFAA EIRDPKKGRR VWLGTYGSAE EAAMAYDREA RRIRGKGARL NFPRDGDGSP 180 RRSNDRPCWT IDLNLPAAAV SGDDDDDAMA KLNLCWRRNL AHQEALSAAK CKIKQCPRDE 240 QMASATPELM EEDASSSRNM VPLSMALQLQ YAAMIAECDR EMEEIAAVER DLERRRRQVF 300 ERRGHLVRQA SLLLD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 58 | TRKRKS |
2 | 108 | 124 | RRKASKKSKYRGVRRRP |
3 | 109 | 125 | RRKASKKSKYRGVRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72360.1 | 2e-24 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM03G06050.2 |